Alport syndrome is a hereditary, progressive renal disease characterized by abnormalities in the glomerular basement membrane (GBM) and commonly associated with cochlear and/or ocular involvement. Genetic testing is used to confirm the diagnosis; COL4A5 variants are responsible for the majority of cases.
Diagnosis
Indications for Testing
- X-linked Alport syndrome
- Unexplained, persistent hematuria, proteinuria, or progressive decline in kidney function, with accompanying hearing loss and eye abnormalities (males)
- Unexplained, persistent hematuria or chronic kidney disease and a family history of adult chronic kidney disease (females)
- A family history of X-linked Alport syndrome (diagnostic, presymptomatic, or carrier testing)
- Autosomal Alport syndrome
- Unexplained, persistent hematuria, proteinuria, or progressive decline in kidney function, with accompanying hearing loss and eye abnormalities (males and females)
Criteria for Diagnosis
- Clinical signs and symptoms
- Changes in renal function (eg, hematuria, proteinuria)
- Sensorineural hearing loss
- Eye abnormalities
- Thinning of basement membrane, as determined by renal biopsy with electron microscopy
- Abnormalities in type IV collagen protein, as determined by immunohistochemical analysis of renal or skin biopsy and/or electron microscopy of renal biopsy
- Family history of X-linked Alport syndrome
- Confirmation by genetic testing
Laboratory Testing
- Initial tests
- Urinalysis
- Gross hemoglobinuria (often first clinical sign)
- Proteinuria
- Urine albumin
- Often manifests after hematuria, prior to gross proteinuria
- Testing for albuminuria should be used, rather than standard urinalysis
- Urine protein quantification
- Urine protein:creatinine ratio >0.2 mg/mg, or
- Urinary protein excretion >4 mg/m2 per hour in timed collection (4 g over 24 hours)
- Glomerular filtration rate
- Standard calculations (Modification of Diet in Renal Disease [MDRD] or Chronic Kidney Disease Epidemiology Collaboration [CKD-EPI]) based on serum creatinine concentrations provide rough estimate of degree of kidney injury (chronic kidney disease [CKD] level 1 to 5)
- Urinalysis
Genetic Testing
- Use to confirm diagnosis
- COL4A5 gene sequencing and deletion/duplication analysis detects ~92% of COL4A5 variants, if present
- COL4A5 variants are responsible for 80-85% of all Alport cases
- The remaining 15-20% of Alport cases are due to variants in COL4A3 or COL4A4 genes
- Sequencing alone – reasonable first-line test
- COL4A5 gene sequencing and deletion/duplication analysis detects ~92% of COL4A5 variants, if present
- Use to exclude diagnosis of Alport syndrome in patients with thin basement membrane nephropathy
Histology
- Immunohistochemical analysis of collagen IV expression using renal or skin biopsy specimen
- Skin biopsy specimens have a higher incidence of false negatives than renal biopsy specimens
- Electron microscopy of renal biopsy specimen
Differential Diagnosis
- Thin basement membrane nephropathy
- Other glomerular diseases (eg, IgA nephropathy)
- Inherited hearing loss syndromes
- Fechtner-Epstein syndrome
Screening
Presymptomatic and carrier testing is recommended for at-risk individuals with previously diagnosed family members.
Monitoring
Proteinuria and albuminuria testing should be initiated by age 1 in children at risk and repeated annually (Kashtan, 2013).
Background
Epidemiology
- Incidence – 1/5,000-50,000 births
- Age – variable
- Autosomal recessive – earliest onset
- X linked – later onset, but earlier than autosomal dominant form
- Autosomal dominant – middle-age onset
- Sex
- M>F for X-linked Alport syndrome – 100% penetrance in males, variable in females
- M:F, equal for autosomal dominant and autosomal recessive forms
Inheritance
- Autosomal recessive and autosomal dominant forms
- 15-20% of Alport syndrome cases
- Pathogenic variant(s) in the COL4A3 or COL4A4 genes
- X-linked form (end-stage renal disease [ESRD])
- 80% of Alport syndrome cases
- Pathogenic variant(s) in the COL4A5 gene
- Sequencing of COL4A5 gene identifies >80% of pathogenic variants, regardless of age
- X-linked heterozygotes (Kashtan, 2015)
- Females with heterozygous COL4A5 variants
- 95% appear to have hematuria, and there may be an increased lifetime risk of ESRD (probability of developing ESRD by age 60 is 30%)
- Carriers are better described as “affected” (Savige, 2013) because they exhibit signs/symptoms
- 10-15% of affected males have de novo variants
Pathophysiology
- Type IV collagen α3, α4, α5 chains in kidney, cochlea, cornea, lens, and retina (Kashtan, 2015) exhibit defects
- Defects lead to loss of type IV collagen in the basement membranes in these structures
- In the kidney, weakened basal lamina results in focal rupture of glomerular capillary walls, resulting in scarring and progressive loss of function
Clinical Presentation
- Renal
- Hematuria and proteinuria, progressive renal insufficiency
- 95% of females and 100% of males have microscopic hematuria in early childhood
- ESRD
- X linked
- 60% of males have ESRD by 30 years and 90% have ESRD by 40 years (Kashtan, 2015)
- 30% of females have ESRD by 60 years and 40% by 80 years (Kashtan, 2015)
- Autosomal recessive – most individuals have ESRD before 30 years
- Autosomal dominant – ESRD onset usually in middle age
- X linked
- Hematuria and proteinuria, progressive renal insufficiency
- Cochlear
- Sensorineural hearing loss
- X linked
- Usually presents in late childhood
- 85% of males have sensorineural deafness by 40 years
- Autosomal recessive – juvenile onset
- Autosomal dominant – associated with later adult onset
- X linked
- Sensorineural hearing loss
- Ocular
- Lenticonus, maculopathy, corneal endothelial vesicles, recurrent corneal abrasions
- Ocular lesions uncommon in adult-onset disease
- Gastrointestinal and bronchopulmonary
- Leiomyomatosis occasionally associated with Alport syndrome
- Thoracic and abdominal aortic aneurysms
ARUP Laboratory Tests
Preferred genetic test for the detection of variants causing X-linked Alport syndrome
Diagnostic errors can occur due to rare sequence variations
Regulatory region variants and deep intronic variants will not be detected
Breakpoints of deletions/duplications will not be determined
Refer to Test Fact Sheet for further content
Massively Parallel Sequencing/ Multiplex Ligation-dependent Probe Amplification
Testing for a known familial sequence variant by sequencing gene of interest; a copy of the family member’s test result documenting the familial gene variant is REQUIRED
To determine if the variant(s) of interest are detectable by this assay, contact an ARUP genetic counselor at 800-242-2787
Massively Parallel Sequencing
Detect early kidney disease in those with diabetes or other risk factors (eg, hypertension)
Quantitative Immunoturbidimetry
Quantitative Spectrophotometry
Use to assess kidney function
Test uses 2021 CKD-EPI eGFR creatinine equation
Quantitative Enzymatic Assay
References
23732293
Beicht S, Strobl-Wildemann G, Rath S, et al. Next generation sequencing as a useful tool in the diagnostics of mosaicism in Alport syndrome. Gene. 2013;526(2):474-477.
19195966
Haas M. Alport syndrome and thin glomerular basement membrane nephropathy: a practical approach to diagnosis. Arch Pathol Lab Med. 2009;133(2):224-232.
20497759
Joosten H, Strunk AL, Meijer S, et al. An aid to the diagnosis of genetic disorders underlying adult-onset renal failure: a literature review. Clin Nephrol. 2010;73(6):454-472.
GeneReviews - Alport Syndrome
Kashtan CE. Alport syndrome. In: Adam MP, Ardinger HH, Pagon RA, et al, eds. GeneReviews, University of Washington; 1993-2022. [Last update: Feb 2019; Accessed: May 2022]
22461141
Kashtan CE, Ding J, Gregory M, et al. Clinical practice recommendations for the treatment of Alport syndrome: a statement of the Alport Syndrome Research Collaborative. Pediatr Nephrol. 2013;28(1):5-11.
21071975
Kashtan CE, Segal Y. Genetic disorders of glomerular basement membranes. Nephron Clin Pract. 2011;118(1):c9-c18.
23349312
Savige J, Gregory M, Gross O, et al. Expert guidelines for the management of Alport syndrome and thin basement membrane nephropathy. J Am Soc Nephrol. 2013;243):364-375.
17570934
Thorner PS. Alport syndrome and thin basement membrane nephropathy. Nephron Clin Pract. 2007;106(2):c82-c88.
26809805
Weber S, Strasser K, Rath S, et al. Identification of 47 novel mutations in patients with Alport syndrome and thin basement membrane nephropathy. Pediatr Nephrol. 2016;31(6):941-955.
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