Sexually Transmitted Infections

Content Review: February 2024 Last Update:

Sexually transmitted infections (STIs) constitute a major health burden in the United States, and the reported incidence is increasing annually. These diseases are frequently asymptomatic and are most often caused by viruses or bacteria. 

Some of the most common viral STIs are caused by HIV and human papillomavirus (HPV). The most common bacterial STIs are chlamydia, gonorrhea, and syphilis. Protozoans may also cause STIs; the most common example of this type of infection is trichomoniasis (a potential cause of vaginitis). STIs can have severe health consequences and, if left untreated, can lead to complications that include pelvic inflammatory disease, infertility, cervical cancer, and chronic pelvic pain. Additionally, STIs such as syphilis and trichomoniasis are associated with an increased risk of HIV acquisition and transmission. Laboratory testing is important for the screening and diagnosis of STIs. Appropriate screening prevents the spread of disease, and accurate diagnosis enables appropriate treatment and patient management. 

Quick Answers for Clinicians

What factors should be considered when collecting specimens for suspected sexually transmitted infections?

Specimen type and collection vary based on disease and are important for accurate laboratory testing results. For information about optimal specimen types and collection instructions for sexually transmitted infection (STI) laboratory testing, refer to ARUP's STD Testing Using Nucleic Acid Amplification Tests–Sample Collection Instructions.

Where can I find additional information about sexually transmitted infection screening, diagnosis, and treatment?

The CDC provides detailed information about sexually transmitted infections (STIs), including screening recommendations, treatment guidelines, data and statistics, and other disease-specific information. 

Which other infections may be important to consider for evaluation during the screening or workup for a sexually transmitted infection?

Trichomoniasis (a potential cause of vaginitis), herpes simplex virus (HSV), hepatitis B virus (HBV), hepatitis C virus (HCV), and human papillomavirus (HPV) may also be sexually transmitted and are often included in a sexually transmitted infection (STI) screening or workup. More information about these conditions can be found in the associated ARUP Consult topics or on the CDC's website. 

Indications for Testing

Laboratory testing to screen asymptomatic individuals is appropriate for most individuals. The Screening section provides detailed screening recommendations based on population.

Laboratory testing for the diagnosis of an STI is appropriate for individuals experiencing:

  • Urgency, frequency, or dysuria in the absence of a documented urinary tract infection (UTI)
  • Vaginal or penile discharge
  • Pelvic pain
  • Prostatitis symptoms
  • Genital lesions such as painful vesicles or nonpainful shallow ulcers

Laboratory Testing

Screening

Screening for STIs is important to control the spread of these diseases because many STIs may be asymptomatic. The recommendations for screening vary by disease and population. The following tables detail the screening recommendations for chlamydia and gonorrhea in women, pregnant individuals, men, men who have sex with men (MSM), other men, and persons with HIV; the last table details screening recommendations for trichomoniasis in women, men, and those with HIV. For transgender individuals, STI screening should be based on current anatomy and sexual practices. 

For detailed information about screening for syphilis, HIV, herpes simplex virus (HSV), and trichomoniasis, refer to the corresponding ARUP Consult topics.

Refer to ARUP's STD Testing Using Nucleic Acid Amplification Tests–Sample Collection Instructions to determine the optimal specimen types and review collection instructions.

Screening Recommendations for Chlamydia
PopulationTesting Recommended in These Patients/Circumstancesa
Women

Sexually active women <25 yrs and sexually active women ≥25 yrs who are at increased riskb; retest approximately 3 mos after treatment

Consider pharyngeal and rectal screening based on reported sexual behavior

Pregnant individualsAll pregnant individuals <25 yrs and those ≥25 yrs who are at increased riskb; retest individuals<25 yrs or those at risk in third trimesterb
MSM

Annually at sites of contact

Repeat testing every 3-6 mos in those at increased riskc

Other men (not MSM)No screening recommended for individuals at low risk,d but consider screening young men in high-prevalence clinical settings or in populations with high burden of infection
Transgender and gender-diverse personsAdapt screening recommendations based on anatomy; consider rectal screening based on reported sexual behavior and exposure
Persons with HIV

All sexually active individuals at first HIV evaluation, then at least annually

More frequent screening may be appropriate depending on risk behaviors and local epidemiology

aUnless otherwise noted, all recommendations come from the CDC. 

bThe CDC defines persons at increased risk as those who have a new sexual partner, >1 sexual partner, a sexual partner with concurrent partners, or a sexual partner who has an STI. 

cAll MSM, including those with HIV infection, if risk behaviors persist or if they or their sexual partners have multiple partners. 

dThe U.S. Preventive Services Task Force concludes that the current evidence is insufficient to assess the balance of benefits and harms of screening men for chlamydia and gonorrhea. 

Sources: CDC, 2021 ; USPSTF, 2021 

Screening Recommendations for Gonorrhea
PopulationTesting Recommended in These Patients/Circumstancesa
Women

Sexually active women <25 yrs and sexually active women ≥25 yrs who are at increased riskb,c; retest approximately 3 mos after treatment

Consider pharyngeal and rectal screening based on reported sexual behavior

Pregnant individualsAll pregnant individuals <25 yrs and those ≥25 yrs who are at increased riskb
MSM

All sexually active MSM: annually at sites of contact

Repeat testing every 3-6 mos in those at increased risk

Other men (not MSM)No screening recommended for men who are not MSM and are at low risk for infectiond
Transgender and gender-diverse personsAdapt screening recommendations based on anatomy; consider rectal screening based on reported sexual behavior and exposure
Persons with HIV

All sexually active individuals at first HIV evaluation, then at least annually

More frequent screening may be appropriate depending on risk behaviors and local epidemiology

aUnless otherwise noted, all recommendations come from the CDC. 

bThe CDC defines persons at increased risk as those who have a new sexual partner, >1 sexual partner, a sexual partner with concurrent partners, or a sexual partner who has an STI. 

cAdditional risk factors for gonorrhea include inconsistent condom use among persons who are not in mutually monogamous relationships, previous or coexisting STIs, and exchanging sex for money or drugs; clinicians should consider the communities they serve and may opt to consult local public health authorities for guidance to identify groups that are at increased risk. 

dThe USPSTF concludes that the current evidence is insufficient to assess the balance of benefits and harms of screening men for chlamydia and gonorrhea. 

Sources: CDC, 2021 ; USPSTF, 2021 

Screening Recommendations for Trichomoniasis
PopulationTesting Recommended in These Patients/Circumstances
WomenScreening is not recommended for asymptomatic women but may be considered in women receiving care in high-prevalence settings or at high risk for STIs
MenNo screening recommended
Persons with HIVRoutine screening for T. vaginalis recommended in asymptomatic persons with HIV infection
Source: CDC, 2021 

Diagnosis

Specific testing recommendations for syphilis, HIV, HSV, and vaginitis caused by trichomoniasis can be found in the corresponding ARUP Consult topics. Accurate diagnosis is important to determine appropriate treatment and medical management. Nucleic acid amplification testing (NAAT) is recommended for the diagnosis of most STIs, although in some cases, culture and serology may be useful.

Refer to ARUP's STD Testing Using Nucleic Acid Amplification Tests–Sample Collection Instructions for optimal specimen types and collection instructions for these laboratory tests.

ARUP Laboratory Tests

For detailed information about the tests below, including ordering recommendations and sample charts, follow the links to ARUP’s Laboratory Test Directory.

Recommended Tests

Includes Lactobacillus (L. gasseri, L. crispatus, and L. jensenii), Gardnerella vaginalis, Atopobium vaginae, Trichomonas vaginalis, Candida glabrata, and other Candida species (C. albicans, C. parapsilosis, C. dubliniensis, and C. tropicalis)

Includes HSV-1, HSV-2, Treponema pallidum, Haemophilus ducreyi, and Chlamydia trachomatis L serovar

For additional information, refer to the Genital Ulcer Disease Panel Test Fact Sheet

Other Testing (Useful in Certain Clinical Situations)

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